Protein ZmOrphan2
ZmOrphan2 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan2
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: C0PEY1
Subgenome: 1

Protein ZmOrphan2

ZmOrphan2 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF00481
Zm00001eb240940_T002
Zm00001eb240940_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d016474DAPseq no logo sequence fimo position
Zm00001d016474DAPseq no logo sequence fimo position
Zm00001d016474ChIPseq no logo sequence fimo position
Zm00001d016474PChIPseq no logo sequence fimo position

Interactions where ZmOrphan2 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan2 is the target  
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There are 149 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb240940_T002 from maize genome v5

Amino Acid Sequence
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MVEAAAGRRTGTSRRRPSGSGGEHRHLVALAVAARVAMVTTRSVGPAAVAEGDGAGAAVTDAGAAGGGGRCMEDFFDCLL
GLLGALGMTWAAARPQRQPRPPLPRGAAGAGPAPTDSRRFAAELRATPGRIAGNGACAVASLYTLQGKKGVNQDAMIFWE
NFCSRDDTIFCGVFDGHGPYGHLVAKRVRDLLPLKLGEGLTTEDGRVTSTGNIKLNTHDVASPEHIDKGSTAISSEAQQN
GEYPETFPALRTSFLKAFRVMDRDLKLHKSIDCFFSGTTAVAVIKQEHNLIIGNLGDSRAVLGTRDENNQLIAVQLTVDL
KPNIPSEAQRIRQRRGRIFALPEEPEVARVWLPKYNSPGLAMARAFGDFCLKDHGVISTPDVSYHHITEKDEFVVLATDG
VWDVLSNDEVVSTVCRATSQASAARFLVESAHRAWRTRFPTSKIDDCAVVCLFLNTDKASESSSSLAKNLADAVEASSAG
RATTVQVSAGASTDVAALVPVPDGNEVSIAETITKLVTLMDLPKDG

MVEAAAGRRTGTSRRRPSGSGGEHRHLVALAVAARVAMVTTRSVGPAAVAEGDGAGAAVTDAGAAGGGGRCMEDFFDCLL
GLLGALGMTWAAARPQRQPRPPLPRGAAGAGPAPTDSRRFAAELRATPGRIAGNGACAVASLYTLQGKKGVNQDAMIFWE
NFCSRDDTIFCGVFDGHGPYGHLVAKRVRDLLPLKLGEGLTTEDGRVTSTGNIKLNTHDVASPEHIDKGSTAISSEAQQN
GEYPETFPALRTSFLKAFRVMDRDLKLHKSIDCFFSGTTAVAVIKQEHNLIIGNLGDSRAVLGTRDENNQLIAVQLTVDL
KPNIPSEAQRIRQRRGRIFALPEEPEVARVWLPKYNSPGLAMARAFGDFCLKDHGVISTPDVSYHHITEKDEFVVLATDG
VWDVLSNDEVVSTVCRATSQASAARFLVESAHRAWRTRFPTSKIDDCAVVCLFLNTDKASESSSSLAKNLADAVEASSAG
RATTVQVSAGASTDVAALVPVPDGNEVSIAETITKLVTLMDLPKDG

MVEAAAGRRTGTSRRRPSGSGGEHRHLVALAVAARVAMVTTRSVGPAAVAEGDGAGAAVTDAGAAGGGGRCMEDFFDCLL
GLLGALGMTWAAARPQRQPRPPLPRGAAGAGPAPTDSRRFAAELRATPGRIAGNGACAVASLYTLQGKKGVNQDAMIFWE
NFCSRDDTIFCGVFDGHGPYGHLVAKRVRDLLPLKLGEGLTTEDGRVTSTGNIKLNTHDVASPEHIDKGSTAISSEAQQN
GEYPETFPALRTSFLKAFRVMDRDLKLHKSIDCFFSGTTAVAVIKQEHNLIIGNLGDSRAVLGTRDENNQLIAVQLTVDL
KPNIPSEAQRIRQRRGRIFALPEEPEVARVWLPKYNSPGLAMARAFGDFCLKDHGVISTPDVSYHHITEKDEFVVLATDG
VWDVLSNDEVVSTVCRATSQASAARFLVESAHRAWRTRFPTSKIDDCAVVCLFLNTDKASESSSSLAKNLADAVEASSAG
RATTVQVSAGASTDVAALVPVPDGNEVSIAETITKLVTLMDLPKDG

MVEAAAGRRTGTSRRRPSGSGGEHRHLVALAVAARVAMVTTRSVGPAAVAEGDGAGAAVTDAGAAGGGGRCMEDFFDCLL
GLLGALGMTWAAARPQRQPRPPLPRGAAGAGPAPTDSRRFAAELRATPGRIAGNGACAVASLYTLQGKKGVNQDAMIFWE
NFCSRDDTIFCGVFDGHGPYGHLVAKRVRDLLPLKLGEGLTTEDGRVTSTGNIKLNTHDVASPEHIDKGSTAISSEAQQN
GEYPETFPALRTSFLKAFRVMDRDLKLHKSIDCFFSGTTAVAVIKQEHNLIIGNLGDSRAVLGTRDENNQLIAVQLTVDL
KPNIPSEAQRIRQRRGRIFALPEEPEVARVWLPKYNSPGLAMARAFGDFCLKDHGVISTPDVSYHHITEKDEFVVLATDG
VWDVLSNDEVVSTVCRATSQASAARFLVESAHRAWRTRFPTSKIDDCAVVCLFLNTDKASESSSSLAKNLADAVEASSAG
RATTVQVSAGASTDVAALVPVPDGNEVSIAETITKLVTLMDLPKDG

MVEAAAGRRTGTSRRRPSGSGGEHRHLVALAVAARVAMVTTRSVGPAAVAEGDGAGAAVTDAGAAGGGGRCMEDFFDCLL
GLLGALGMTWAAARPQRQPRPPLPRGAAGAGPAPTDSRRFAAELRATPGRIAGNGACAVASLYTLQGKKGVNQDAMIFWE
NFCSRDDTIFCGVFDGHGPYGHLVAKRVRDLLPLKLGEGLTTEDGRVTSTGNIKLNTHDVASPEHIDKGSTAISSEAQQN
GEYPETFPALRTSFLKAFRVMDRDLKLHKSIDCFFSGTTAVAVIKQEHNLIIGNLGDSRAVLGTRDENNQLIAVQLTVDL
KPNIPSEAQRIRQRRGRIFALPEEPEVARVWLPKYNSPGLAMARAFGDFCLKDHGVISTPDVSYHHITEKDEFVVLATDG
VWDVLSNDEVVSTVCRATSQASAARFLVESAHRAWRTRFPTSKIDDCAVVCLFLNTDKASESSSSLAKNLADAVEASSAG
RATTVQVSAGASTDVAALVPVPDGNEVSIAETITKLVTLMDLPKDG

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00481
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Nucleotide Sequence
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CGCGAAGTCTCGCCGACTCCGACAA...

GRMZM2G102560_T01 from maize genome v3

Amino Acid Sequence
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MVEAAAGRRTGTSRRRPSGSGGEHRHLVALAVAARVAMVTTRSVGPAAVAEGDGAGAAVTDAGAAGGGGRCMEDFFDCLL
GLLGALGMTWAAARPQRQPRPPLPRGAAGAGPAPTDSRRFAAELRATPGRIAGNGACAVASLYTLQGKKGVNQDAMIFWE
NFCSRDDTIFCGVFDGHGPYGHLVAKRVRDLLPLKLGEGLTTEDGRVTSTGNIKLNTHDVASPEHIDKGSTAISSEAQQN
GEYPETFPALRTSFLKAFRVMDRDLKLHKSIDCFFSGTTAVAVIKQEHNLIIGNLGDSRAVLGTRDENNQLIAVQLTVDL
KPNIPSEAQRIRQRRGRIFALPEEPEVARVWLPKYNSPGLAMARAFGDFCLKDHGVISTPDVSYHHITEKDEFVVLATDG
VSRLSTYAPFIPSVFRSF

Nucleotide Sequence
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CGCGAAGTCTCGCCGACTCCGACAA...

GRMZM2G102560_T02 from maize genome v3


Related TFome: pUT6000

Amino Acid Sequence
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MVEAAAGRRTGTSRRRPSGSGGEHRHLVALAVAARVAMVTTRSVGPAAVAEGDGAGAAVTDAGAAGGGGRCMEDFFDCLL
GLLGALGMTWAAARPQRQPRPPLPRGAAGAGPAPTDSRRFAAELRATPGRIAGNGACAVASLYTLQGKKGVNQDAMIFWE
NFCSRDDTIFCGVFDGHGPYGHLVAKRVRDLLPLKLGEGLTTEDGRVTSTGNIKLNTHDVASPEHIDKGSTAISSEAQQN
GEYPETFPALRTSFLKAFRVMDRDLKLHKSIDCFFSGTTAVAVIKQEHNLIIGNLGDSRAVLGTRDENNQLIAVQLTVDL
KPNIPSEAQRIRQRRGRIFALPEEPEVARVWLPKYNSPGLAMARAFGDFCLKDHGVISTPDVSYHHITEKDEFVVLATDG
VWDVLSNDEVVSTVCRATSQASAARFLVESAHRAWRTRFPTSKIDDCAVVCLFLNTDKASESSSSLAKNLADAVEASSAG
RATTVQVSAGASTDVAALVPVPDGNEVSIAETITKLVTLMDLPKDG

Nucleotide Sequence
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ATACTCATCCAGAGAGAGACACGGA...

Zm00001d016474_T001 from maize genome v4

Amino Acid Sequence
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MVEAAAGRRTGTSRRRPSGSGGEHRHLVALAVAARVAMVTTRSVGPAAVAEGDGAGAAVTDAGAAGGGGRCMEDFFDCLL
GLLGALGMTWAAARPQRQPRPPLPRGAAGAGPAPTDSRRFAAELRATPGRIAGNGACAVASLYTLQGKKGVNQDAMIFWE
NFCSRDDTIFCGVFDGHGPYGHLVAKRVRDLLPLKLGEGLTTEDGRVTSTGNIKLNTHDVASPEHIDKGSTAISSEAQQN
GEYPETFPALRTSFLKAFRVMDRDLKLHKSIDCFFSGTTAVAVIKQEHNLIIGNLGDSRAVLGTRDENNQLIAVQLTVDL
KPNIPSEAQRIRQRRGRIFALPEEPEVARVWLPKYNSPGLAMARAFGDFCLKDHGVISTPDVSYHHITEKDEFVVLATDG
VWDVLSNDEVVSTVCRATSQASAARFLVESAHRAWRTRFPTSKIDDCAVVCLFLNTDKASESSSSLAKNLADAVEASSAG
RATTVQVSAGASTDVAALVPVPDGNEVSIAETITKLVTLMDLPKDG

Nucleotide Sequence
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ATCCCCGCTGAATCAGCAGCAGCAA...

Zm00001eb240940_T001 from maize genome v5

Amino Acid Sequence
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MVEAAAGRRTGTSRRRPSGSGGEHRHLVALAVAARVAMVTTRSVGPAAVAEGDGAGAAVTDAGAAGGGGRCMEDFFDCLL
GLLGALGMTWAAARPQRQPRPPLPRGAAGAGPAPTDSRRFAAELRATPGRIAGNGACAVASLYTLQGKKGVNQDAMIFWE
NFCSRDDTIFCGVFDGHGPYGHLVAKRVRDLLPLKLGEGLTTEDGRVTSTGNIKLNTHDVASPEHIDKGSTAISSEAQQN
GEYPETFPALRTSFLKAFRVMDRDLKLHKSIDCFFSGTTAVAVIKQEHNLIIGNLGDSRAVLGTRDENNQLIAVQLTVDL
KPNIPSEAQRIRQRRGRIFALPEEPEVARVWLPKYNSPGLAMARAFGDFCLKDHGVISTPDVSYHHITEKDEFVVLATDG
VSRLSTYAPFIPSVFRSF

Nucleotide Sequence
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CGCGAAGTCTCGCCGACTCCGACAA...


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